Mueller CW, Carminati A, Kaiser C, Subke JA, Gutjahr C | Editorial: Rhizosphere Functioning and Structural Development as Complex Interplay Between Plants, Microorganisms and Soil Minerals | | Frontiers in Environmental Science | 2019 | 7 | Article 130 | 10.3389/fenvs.2019.00130 | | papers |
Tobias H. Uber, Thorsten Hüffer, Sibylle Planitz, Torsten C. Schmidt | Characterization of sorption properties of high-density polyethylene using the poly-parameter linearfree-energy relationships | | Environmental Pollution | 2019 | | 312-319 | 10.1016/j.envpol.2019.02.024 | | papers |
Forstner SJ, Wechselberger V, Stecher S, Müller S, Keiblinger KM, Wanek W, Schleppi P, Gundersen P, Tatzber M, Gerzabek MH, Zechmeister‐Boltenstern S | Resistant Soil Microbial Communities Show Signs of Increasing Phosphorus Limitation in Two Temperate Forests After Long-Term Nitrogen Addition | | Frontiers in Forests and Global Change | 2019 | 2 | Article 73 | 10.3389/ffgc.2019.00073 | | papers |
Gabriel Sigmund, Stephanie Castan, Christopher Wabnitz, Rani Bakkour, Thorsten Hüffer, Thilo Hofmann, Martin Elsner | NO2 and natural organic matter affect both soot aggregation behavior and sorption of S-metolachlor | | Environmental Science: Processes & Impacts | 2019 | 21 | 1729-1735 | 10.1039/C9EM00354A | | papers |
Ivana Mati Bujagi, Svetlana Gruji, Mila Lauevi, Thilo Hofmann, Malfatti SE | Emerging contaminants in sediment core from the Iron Gate I reservoir on the Danube River | | Science of The Total Environment | 2019 | | 77-87 | 10.1016/j.scitotenv.2019.01.205 | | papers |
Stephanie Laughton, Adam Laycock, Frank von der Kammer, Thilo Hofmann, Elizabeth A. Casman, Sónia M. Rodrigues, Gregory V. Lowry | Persistence of copper-based nanoparticle-containing foliar sprays in Lactuca sativa (lettuce) characterized by spICP-MS | | Journal of Nanoparticle Research | 2019 | 174 | | 10.1007/s11051-019-4620-4 | | papers |
Wanek W, Zezula D, Wasner D, Mooshammer M, Prommer J | A novel isotope pool dilution approach to quantify gross rates of key abiotic and biological processes in the soil phosphorus cycle | | Biogeosciences | 2019 | 16 | 3047-3068 | 10.5194/bg-16-3047-2019 | | papers |
Gorka S, Dietrich M, Mayerhofer W, Gabriel R, Wiesenbauer J, Martin V, Zheng Q, Imai B, Prommer J, Weidinger M, Schweiger P, Eichorst SA, Wagner M, Richter A, Schintlmeister A, Woebken D, Kaiser C | Rapid transfer of plant photosynthates to soil bacteria via ectomycorrhizal hyphae and its interaction with nitrogen availability | | Frontiers Microbioly | 2019 | 10 | Article 168 | 10.3389/fmicb.2019.00168 | | papers |
Stephanie Castan, Gabriel Sigmund, Thorsten Hüffer, Thilo Hofmann | Biochar particle aggregation in soil pore water: the influence of ionic strength and interactions with pyrene | | Environmental Science: Processes & Impacts | 2019 | 21 | 1722-1728 | 10.1039/C9EM00277D | | papers |
Marañon-Jimenez S, Schiestl RH, Richter A, Sigurdsson BD, Fuchslueger L, Leblans NIW, Janssens IA | Coupled carbon and nitrogen losses in response to seven years of chronic warming in subarctic soils | | Soil Biology and Biochemistry | 2019 | 134 | 152-161 | 10.1016/j.soilbio.2019.03.028 | | papers |
zhang S, Zheng Q, Noll L, Hu Y, Wanek W | Environmental effects on soil microbial nitrogen use efficiency are controlled by allocation of organic nitrogen to microbial growth and regulate gross N mineralization | | Soil Biology and Biochemistry | 2019 | 135 | 304-315 | 10.1016/j.soilbio.2019.05.019 | | papers |
Zheng BX, Zhao Y, Bi QF, Zhou GW, Wang HJ, Hao XL, Ding K | How to disentangle microbially functional complexity: an insight from the network analysis of C, N, P and S cycling genes | | Science Bulletin | 2019 | 64 | 1129-1131 | 10.1016/j.scib.2019.06.011 | | papers |
Fuchslueger L, Wild B, Mooshammer M, Takriti M, Kienzl S, Knoltsch A, Hofhansl F, Bahn M, Richter A | Microbial carbon and nitrogen cycling responses to drought and temperature in differently managed mountain grasslands | | Soil Biology and Biochemistry | 2019 | 135 | 144-153 | 10.1016/j.soilbio.2019.05.002 | | papers |
Tong Zhang, Gregory V. Lowry, Natalie L. Capiro, Jianmin Chen, Wei Chen, Yongsheng Chen, Dionysios D. Dionysiou, Daniel W. Elliott, Subhasis Ghoshal, Thilo Hofmann, Heileen Hsu-Kim, Joseph Hughes, Chuanjia Jiang, Guibin Jiang, Chuanyong Jing, Michael Kavanaugh, Qilin Li, Sijin Liu, Jie Ma, Bingcai Pan, Tanapon Phenrat, Xiaolei Qu, Xie Quan, Navid Saleh, Peter J. Vikesland, Qiuquan Wang, Paul Westerhoff, Michael S. Wong, Tian Xia, Baoshan Xing, Bing Yan, Lunliang Zhang, Dongmei Zhouaa, Pedro J. J. Alvarez | In situ remediation of subsurface contamination: opportunities and challenges for nanotechnology and advanced materials | | Environmental Science: Nano | 2019 | 5 | 1283-1302 | 10.1039/c9en00143c | | papers |
Wagner M | Mikrobiome – Wissensstand und Perspektiven | Bayerische Akademie der Wissenschaften; Verlag Dr. Friedrich Pfeil | | 2019 | | 17-29 | | | book |
Noll L, zhang S, Zheng Q, Hu Y, Wanek W | Wide-spread limitation of soil organic nitrogen transformations by substrate availability and not by extracellular enzyme content | | Soil Biology and Biochemistry | 2019 | 133 | 37-49 | 10.1016/j.soilbio.2019.02.016 | | papers |
Patrick Meister, Carolina Reyes | The Carbon-Isotope Record of the Sub-Seafloor Biosphere | | Geosciences | 2019 | 9 | 507 | 10.3390/geosciences9120507 | | papers |
Polz MF, Rajora O | Population Genomics: Microorganisms | Nature Springer | | 2019 | | | | | book |
Noll L, zhang S, Wanek W | Novel high-throughput approach to determine key processes of soil organic nitrogen cycling: Gross protein depolymerization and microbial amino acid uptake | | Soil Biology and Biochemistry | 2019 | 130 | 73-81 | 10.1016/j.soilbio.2018.12.005 | | papers |
Arnaud Clavier, Antonia Praetorius, Serge Stoll | Determination of nanoparticle heteroaggregation attachment efficiencies and rates in presence of natural organic matter monomers. Monte Carlo modelling | | Science of The Total Environment | 2019 | | 530-540 | 10.1016/j.scitotenv.2018.09.017 | | papers |
Flores Orozco Adrián, Malfatti SE, Matthias Bücker, Jakob Gallistl, Thilo Hofmann, Frederic Nguyen | Complex-conductivity monitoring to delineate aquifer pore clogging during nanoparticles injection | | Geophysical Journal International | 2019 | 3 | 1838-1852 | 10.1093/gji/ggz255 | | papers |
Juyal A, Otten W, Falconer R, Hapca S, Schmidt H, Baveye PC, Eickhorst T | Combination of techniques to quantify the distribution of bacteria in their soil microhabitats at different spatial scales | | Geoderma | 2019 | 334 | 165-174 | 10.1016/j.geoderma.2018.07.031 | | papers |
Thorsten Hüffer, Florian Metzelder, Gabriel Sigmund, Sophie Slawek, Torsten C. Schmidt, Thilo Hofmann | Polyethylene microplastics influence the transport of organic contaminants in soil | | Science of The Total Environment | 2019 | | 242-247 | 10.1016/j.scitotenv.2018.12.047 | | papers |
Charlotte Henkel, Thorsten Hüffer, Thilo Hofmann | The leaching of phthalates from PVC can be determined with an infinite sink approach | | MethodsX | 2019 | 6 | 2729-2734 | 10.1016/j.mex.2019.10.026 | | papers |
Frédéric Loosli, Zebang Yi, Jingjing Wang, Mohammed Baalousha | Improved extraction efficiency of natural nanomaterials in soils to facilitate their characterization using a multimethod approach | | Science of The Total Environment | 2019 | 677 | 34-46 | 10.1016/j.scitotenv.2019.04.301 | | papers |
Lucaciu R, Pelikan C, Gerner SM, Zioutis C, Köstlbacher S, Marx H, Herbold CW, Schmidt H, Rattei T | A Bioinformatics Guide to Plant Microbiome Analysis | | Frontiers in Plant Science | 2019 | 10 | Article 1313 | 10.3389/fpls.2019.01313 | | papers |
Maria Pinto, Teresa M. Langer, Thorsten Hüffer, Thilo Hofmann, Gerhard J. Herndl | The composition of bacterial communities associated with plastic biofilms differs between different polymers and stages of biofilm succession | | PloS one | 2019 | 14 | 1-20 | 10.1371/journal.pone.0217165 | | papers |
Thorsten Hüffer, Stephan Wagner, Thorsten Reemtsma, Thilo Hofmann | Sorption of organic substances to tire wear materials: Similarities and differences with other types of microplastic | | Trends in Analytical Chemistry | 2019 | 113 | 392-401 | 10.1016/j.trac.2018.11.029 | | papers |
Tobias H. Uber, Thorsten Hüffer, Sibylle Planitz, Thorsten C. Schmidt | Sorption of non-ionic organic compounds by polystyrene in water | | Science of The Total Environment | 2019 | 682 | 348-355 | 10.1016/j.scitotenv.2019.05.040 | | papers |
Flora M. Brocza, Harald Biester, Jan-Helge Richard, Stephan M. Kraemer, Jan G. Wiederhold | Mercury Isotope Fractionation in the Subsurface of a Hg(II) Chloride-Contaminated Industrial Legacy Site | | Environmental Science & Technology | 2019 | 13 | 7296-7305 | 10.1021/acs.est.9b00619 | | papers |
Morera-Beita A, Sánchez D, Wanek W, Hofhansl F, Huber W, Chacón-Madrigal E, Montero-Munoz JL, Silla F | Beta diversity and oligarchic dominance in the tropical forests of Southern Costa Rica | | Biotropica | 2019 | 51 | 117-128 | 10.1111/btp.12638 | | papers |
Fuentes S, Arroyo JI, Rodriguez-Marconi S, Masotti I, Alarcon-Schumacher T, Polz MF, Trefault N, de la Iglesia R, Díez B | Summer phyto- and bacterioplankton communities during low and high productivity scenarios in the Western Antarctic Peninsula | | Polar Biology | 2019 | 42 | 159-169 | 10.1007/s00300-018-2411-5 | | papers |
Martin Miernicki, Thilo Hofmann, Iris Eisenberger, Frank von der Kammer, Antonia Praetorius | Legal and practical challenges in classifying nanomaterials according to regulatory definitions | | Nature Nanotechnology | 2019 | 14 | 208–216 | https://doi.org/10.1038/s41565-019-0396-z | | papers |
Nanna B. Hartmann, Thorsten Hüffer, Richard C. Thompson, Martin Hassellv, Anja Verschoor, Anders E. Daugaard, Sinja Rist, Therese Karlsson, Nicole Brennholt, Matthew Cole, Maria P. Herrling, Maren C. Hess, Natalia P. Ivleva, Amy L. Lusher, Martin Wagner | Are we speaking the same language? Recommendations for a definition and categorisation framework for plastic debris | | Environmental Science & Technology | 2019 | 3 | 1039-1047 | 10.1021/acs.est.8b05297 | | papers |
Johannes Besold, Anne Eberle, Vincent Noël, Katharina Kujala, Naresh Kumar, Andreas C. Scheinost, Juan Lezama Pacheco, Scott Fendorf, Britta Planer-Friedrich | Antimonite Binding to Natural Organic Matter: Spectroscopic Evidence from a Mine Water Impacted Peatland | | Environmental Science & Technology | 2019 | 53 | 10792-10802 | 10.1021/acs.est.9b03924 | | papers |
Zheng Q, Hu Y, zhang S, Noll L, Böckle T, Dietrich M, Herbold CW, Eichhorst SA, Woebken D, Richter A, Wanek W | Soil multifunctionality is affected by the soil environment and by microbial community composition and diversity | | Soil Biology and Biochemistry | 2019 | 136 | Article 107521 | 10.1016/j.soilbio.2019.107521 | | papers |
Zheng Q, Hu Y, zhang S, Noll L, Boeckle T, Richter A, Wanek W | Growth explains microbial carbon use efficiency across soils differing in land use and geology | | Soil Biology and Biochemistry | 2019 | 128 | 45-55 | 10.1016/j.soilbio.2018.10.006 | | papers |
Terrer C, Jackson RB, Prentice IC, Keenan TF, Kaiser C, Vicca S, Fisher JB, Reich PB, Stocker BD, Hungate BA, Schiestl RH, McCallum I, Soudzilovskaia NA, Cernusak LA, Talhelm AF, Van Sundert K, Piao S, Newton PCD, Hoveden MJ, Blumenthal DM, Liu YY, Muller C, Winter K, Field CB, Viechtbauer W, Van Lissa CJ, Hoosbeek MR, Watanabe M, Kolke T, Leshyk VO, Polley HW, Franklin O | Nitrogen and phosphorus constrain the CO2 fertilization of global plant biomass | | Nature Climate Change | 2019 | 9 | 684-689 | /10.1038/s41558-019-0545-2 | | papers |
Sebastian Kallus, Lukas Uhlik, Sushilla van Schoonhoven, Karla Pelivan, Walter Berger, va A. Enyedy, Thilo Hofmann, Petra Heffeter, Christian R. Kowol, Bernhard K. Keppler | Synthesis and biological evaluation of biotin-conjugated anticancer thiosemicarbazones and their iron(III) and copper(II) complexes | | Journal of Inorganic Biochemistry | 2019 | | 85-97 | 10.1016/j.jinorgbio.2018.10.006 | | papers |
Martin Walter, Walter D. C. Schenkeveld, Michael Reissner, Lars Gille, Stephan M. Kraemer | The Effect of pH and biogenic ligands on the weathering of chrysotile asbestos: The pivotal role of tetrahedral Fe in dissolution kinetics and radical formation | | Chemistry A European Journal | 2019 | 13 | 3286-3300 | 10.1002/chem.201804319 | | papers |
Manuel D. Montaño, Frank von der Kammer, Chad W. Cuss, James F. Ranville | Opportunities for examining the natural nanogeochemical environment using recent advances in nanoparticle analysis | | Journal of Analytical Atomic Spectrometry | 2019 | 34 | 1768-1772 | 10.1039/C9JA00168A | | papers |
Schnecker J, Bowles T, Hobbie EA, Smith RG, Grandy AS | Substrate quality and concentration control decomposition and microbial strategies in a model soil system | | Biogeochemistry | 2019 | 144 | 47-59 | 10.1007/s10533-019-00571-8 | | papers |
Yin L, Corneo PE, Richter A, Wang P, Cheng W, Dijkstra FA | Variation in rhizosphere priming and microbial growth and carbon use efficiency caused by wheat genotypes and temperatures | | Soil Biology and Biochemistry | 2019 | 134 | 54-61 | 10.1016/j.soilbio.2019.03.019 | | papers |
Tamara Dordevic, Uwe Kolitsch, Todor Serafimovski, Goran Tasev, Nathalie Tepe, Michael Stger-Pollach, Thilo Hofmann, Blazo Boev | Mineralogy and weathering of realgar-rich tailings at a former As-Sb-Cr mine at Lojane, North Macedonia | | The Canadian Mineralogist | 2019 | 57 | 1-21 | 10.3749/canmin.1800074 | | papers |
Ulisse Cardini, Marco Bartoli, Sebastian Lücker, Maria Mooshammer, Julia Polzin, Raymond W. Lee, Malfatti SE, Thilo Hofmann, Miriam Weber, Jillian M. Petersen | Chemosymbiotic bivalves contribute to the nitrogen budget of seagrass ecosystems | | The ISME journal | 2019 | | 3131–3134 | 10.1038/s41396-019-0486-9 | | papers |
VanInsberghe D, Varian B, Erdman S, Polz MF | Diarrheal events can trigger long-term Clostridium difficile colonization with recurrent blooms. | | Nature Microbiol | 2019 | | | | | papers |
Nanna B. Hartmann, Thorsten Hüffer, Richard C. Thompson, Gaul T, Anja Verschoor, Anders E. Daugaard, Sinja Rist, Therese Karlsson, Nicole Brennholt, Matthew Cole, Maria P. Herrling, Maren C. Hess, Natalia P. Ivleva, Amy L. Lusher, Martin Wagner | Response to the Letter to the Editor Regarding Our Feature “Are We Speaking the Same Language? Recommendations for a Definition and Categorization Framework for Plastic Debris” | | Environmental Science & Technology | 2019 | 53 | 4678−4679 | 10.1021/acs.est.9b02238 | | other |
Körner C, Riedl S, Keplinger T, Richter A, Wiesenbauer J, Schweingruber F, Hiltbrunner E | Life at 0 °C: the biology of the alpine snowbed plant Soldanella pusilla | | Alpine Botany | 2019 | 129 | 63-80 | 10.1007/s00035-019-00220-8 | | papers |
Richard J Williams, Samuel Harrison, Virginie Keller, Jeroen Kuenen, Stephen Lofts, Antonia Praetorius, Claus Svendsen, Lucie C Vermeulen, Jikke van Wijnen | Models for assessing engineered nanomaterial fate and behaviour in the aquatic environment | | Current Opinion in Environmental Sustainability | 2019 | | 105-115 | 10.1016/j.cosust.2018.11.002 | | papers |
Johannes Besold, Naresh Kumar, Andreas C. Scheinost, Juan Lezama Pacheco, Scott Fendorf, Britta Planer-Friedrich | Antimonite Complexation with Thiol and Carboxyl/Phenol Groups of Peat Organic Matter | | Environmental Science & Technology | 2019 | 53 | 5005-5015 | 10.1021/acs.est.9b00495 | | papers |
Klufa J, Bauer T, Hanson B, Herbold CW, Starkl P, Lichtenberger B, Srutkova D, Schulz D, Vujic I, Mohr T, Rappersberger K, Bodenmiller B, Kozakova H, Knapp S, Loy A, Sibilia M | Hair eruption initiates and commensal skin microbiota aggravate adverse events of anti-EGFR therapy | | Sci Transl Med | 2019 | 11 | eaax2693 | 10.1126/scitranslmed.aax2693 | 31826981 | papers |
Pelikan C, Jaussi M, Wasmund K, Seidenkrantz MS, Pearce C, Kuzyk ZZA, Herbold CW, Røy H, Kjeldsen KU, Loy A | Glacial runoff promotes deep burial of sulfur cycling-associated microorganisms in marine sediments | | Front Microbiol | 2019 | 10 | 2558 | 10.3389/fmicb.2019.02558 | 31787951 | papers |
Oberhofer M, Hess J, Leutgeb M, Gössnitzer F, Rattei T, Wawrosch C, Zotchev SB | Exploring Actinobacteria Associated With Rhizosphere and Endosphere of the Native Alpine Medicinal Plant Subspecies . | | Front Microbiol | 2019 | | 2531 | 10.3389/fmicb.2019.02531 | 31781058 | papers |
Vilperte V, Lucaciu CR, Halbwirth H, Boehm R, Rattei T, Debener T | Hybrid de novo transcriptome assembly of poinsettia (Euphorbia pulcherrima Willd. Ex Klotsch) bracts. | | BMC genomics | 2019 | 1 | 900 | 10.1186/s12864-019-6247-3 | 31775622 | papers |
Maixner F, Thorell K, Granehäll L, Linz B, Moodley Y, Rattei T, Engstrand L, Zink A | Helicobacter pylori in ancient human remains. | | World J. Gastroenterol. | 2019 | 42 | 6289-6298 | 10.3748/wjg.v25.i42.6289 | 31754290 | papers |
Lucaciu R, Pelikan C, Gerner SM, Zioutis C, Köstlbacher S, Marx H, Herbold CW, Schmidt H, Rattei T | A Bioinformatics Guide to Plant Microbiome Analysis. | | Front Plant Sci | 2019 | | 1313 | 10.3389/fpls.2019.01313 | 31708944 | papers |
Yuen B, Polzin J, Petersen JM | Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve. | | BMC genomics | 2019 | 1 | 820 | 10.1186/s12864-019-6177-0 | 31699041 | papers |
Gomes A, Oudot C, Macià A, Foito A, Carregosa D, Stewart D, Van de Wiele T, Berry D, Motilva MJ, Brenner C, Dos Santos CN | Berry-Enriched Diet in Salt-Sensitive Hypertensive Rats: Metabolic Fate of (Poly)Phenols and the Role of Gut Microbiota. | | Nutrients | 2019 | 11 | 2634 | 10.3390/nu11112634 | 31684148 | papers |
Chase AB, Arevalo P, Brodie EL, Polz MF, Karaoz U, Martiny JBH | Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria. | | mBio | 2019 | 5 | | 10.1128/mBio.02361-19 | 31662456 | papers |
Chase AB, Arevalo P, Brodie EL, Polz MF, Karaoz U, Martiny JBH | Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria. | | mBio | 2019 | 5 | e02361-19 | 10.1128/mBio.02361-19 | 31662456 | papers |
Ansorge R, Romano S, Sayavedra L, Porras MÁG, Kupczok A, Tegetmeyer HE, Dubilier N, Petersen JM | Functional diversity enables multiple symbiont strains to coexist in deep-sea mussels. | | Nat Microbiol | 2019 | 12 | 2487-2497 | 10.1038/s41564-019-0572-9 | 31611646 | papers |
Tett A, Huang KD, Asnicar F, Fehlner-Peach H, Pasolli E, Karcher N, Armanini F, Manghi P, Bonham K, Zolfo M, De Filippis F, Magnabosco C, Bonneau R, Lusingu J, Amuasi J, Reinhard K, Rattei T, Boulund F, Engstrand L, Zink A, Collado MC, Littman DR, Eibach D, Ercolini D, Rota-Stabelli O, Huttenhower C, Maixner F, Segata N | The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations. | | Cell Host Microbe | 2019 | 5 | 666-679.e7 | 10.1016/j.chom.2019.08.018 | 31607556 | papers |
Schepaschenko D, et al, Wanek W, Zo-Bi IC | The Forest Observation System, building a global reference dataset for remote sensing of forest biomass | | Scientific Data | 2019 | 6 | Article 198 | 10.1038/s41597-019-0196-1 | 31601817 | papers |
Borel N, Horn M, Greub G | International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 20 March 2019, Seattle, WA, USA. | | Int. J. Syst. Evol. Microbiol. | 2019 | 69 | 3654-3656 | 10.1099/ijsem.0.003738 | 31592763 | other |
Riva A, Kuzyk O, Forsberg E, Siuzdak G, Pfann C, Herbold CW, Daims H, Loy A, Warth B, Berry D | A fiber-deprived diet disturbs the fine-scale spatial architecture of the murine colon microbiome. | | Nat Commun | 2019 | 1 | 4366 | 10.1038/s41467-019-12413-0 | 31554820 | papers |
Adamczyk B, Sietiö OM, Straková P, Prommer J, Wild B, Hagner M, Pihlatie M, Fritze H, Richter A, Heinonsalo J | Plant roots increase both decomposition and stable organic matter formation in boreal forest soil | | Nature communications | 2019 | 10 | Article 3982 | 10.1038/s41467-019-11993-1 | 31484931 | papers |
Peguero G, Sardans J, Asensio D, FEMS Microbiol. Lett., Gargallo-Garriga A, Grau O, Llusià J, Margalef O, Márquez L, Ogaya R, Urbina I, Courtois EA, Stah C, Van Langenhove L, Verryckt LT, Richter A, anssens IA, Schiestl RH | Nutrient scarcity strengthens soil fauna control over leaf litter decomposition in tropical rainforests | | Proceedings of the Royal Society B: Biological Sciences | 2019 | 286 | Article 20191300 | 10.1098/rspb.2019.1300 | 31480974 | papers |
Wang B, Qin W, Ren Y, Zhou X, Jung MY, Han P, Eloe-Fadrosh EA, Li M, Zheng Y, Lu L, Yan X, Ji J, Liu Y, Liu L, Heiner C, Hall R, Martens-Habbena W, Herbold CW, Rhee SK, Bartlett DH, Huang L, Ingalls AE, Wagner M, Stahl DA, Jia Z | Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons. | | ISME J | 2019 | 12 | 3067-3079 | 10.1038/s41396-019-0493-x | 31462715 | papers |
Kjeldsen KU, Schreiber L, Thorup CA, Boesen T, Bjerg JT, Yang T, Dueholm MS, Larsen S, Risgaard-Petersen N, Nierychlo M, Schmid M, Bøggild A, van de Vossenberg J, Geelhoed JS, Meysman FJR, Wagner M, Nielsen PH, Nielsen LP, Schramm A | On the evolution and physiology of cable bacteria. | | Proc. Natl. Acad. Sci. U.S.A. | 2019 | 38 | 19116-19125 | 10.1073/pnas.1903514116 | 31427514 | papers |
Bale NJ, Palatinszky M, Rijpstra WIC, Herbold CW, Wagner M, Sinninghe Damsté JS | Membrane Lipid Composition of the Moderately Thermophilic Ammonia-Oxidizing Archaeon " Nitrosotenuis uzonensis" at Different Growth Temperatures. | | Appl. Environ. Microbiol. | 2019 | 20 | 1–17 | 10.1128/AEM.01332-19 | 31420340 | papers |
Arevalo P, VanInsberghe D, Elsherbini J, Gore J, Polz MF | A Reverse Ecology Approach Based on a Biological Definition of Microbial Populations. | | Cell | 2019 | 4 | 820-834.e14 | 10.1016/j.cell.2019.06.033 | 31398339 | papers |
Arevalo P, VanInsberghe D, Elsherbini J, Gore J, Polz MF | A Reverse Ecology Approach Based on a Biological Definition of Microbial Populations. | | Cell | 2019 | 4 | 820-834.e14 | 10.1016/j.cell.2019.06.033 | 31398339 | papers |
Cardini U, Bartoli M, Lücker S, Mooshammer M, Polzin J, Lee RW, Micić V, Hofmann T, Weber M, Petersen JM | Chemosymbiotic bivalves contribute to the nitrogen budget of seagrass ecosystems. | | ISME J | 2019 | 12 | 3131-3134 | 10.1038/s41396-019-0486-9 | 31395953 | papers |
Romero Picazo D, Dagan T, Ansorge R, Petersen JM, Dubilier N, Kupczok A | Horizontally transmitted symbiont populations in deep-sea mussels are genetically isolated. | | ISME J | 2019 | 12 | 2954-2968 | 10.1038/s41396-019-0475-z | 31395952 | papers |
Hausmann B, Vandieken V, Pjevac P, Schreck K, Herbold CW, Loy A | Draft Genome Sequence of Desulfosporosinus fructosivorans Strain 63.6F, Isolated from Marine Sediment in the Baltic Sea | | Microbiology Resource Announcements | 2019 | 8 | e00427-1 | 10.1128/MRA.00427-19 | 31371535 | papers |
Furze M., Drake JE, Wiesenbauer J, Richter A, Pendall E | Carbon isotopic tracing of sugars throughout whole-trees exposed to climate warming | | Plant Cell and Environment | 2019 | 42 | 3253-3263 | 10.1111/pce.13625 | 31335973 | papers |
Colangelo J, Pelikan C, Herbold CW, Altshuler I, Loy A, Whyte LG, Wing BA | Diversity decoupled from sulfur isotope fractionation in a sulfate reducing microbial community | | Geobiology | 2019 | 17 | 660-67 | 10.1111/gbi.12356 | 31328364 | papers |
Hausmann B, Pjevac P, Huemer M, Herbold CW, Pester M, Loy A | Draft Genome Sequence of Desulfosporosinus sp. Strain Sb-LF, Isolated from an acidic peatland in Germany | | Microbiology Resource Announcements | 2019 | 8 | e00428-1 | 10.1128/MRA.00428-19 | 31320430 | papers |
Pjevac P, Dyksma S, Goldhammer T, Mujakić I, Koblížek M, Greuter L, Amann R, Orlić S | In situ abundance and carbon fixation activity of distinct anoxygenic phototrophs in the stratified seawater lake Rogoznica. | | Environ. Microbiol. | 2019 | 10 | 3896-3908 | 10.1111/1462-2920.14739 | 31299137 | papers |
Steiner PA, De Corte D, Geijo J, Mena C, Yokokawa T, Rattei T, Herndl GJ, Sintes E | Highly variable mRNA half-life time within marine bacterial taxa and functional genes. | | Environ Microbiol | 2019 | 10 | 3873-3884 | 10.1111/1462-2920.14737 | 31298776 | papers |
Han P, Yu Y, Zhou L, Tian Z, Li Z, Hou L, Liu M, Wu Q, Wagner M, Men Y | Specific micropollutant biotransformation pattern by the comammox bacterium Nitrospira inopinata | | Environ. Sci. Technol. | 2019 | 15 | 8695-8705 | 10.1021/acs.est.9b01037 | 31294971 | papers |
Laffy PW, Botté ES, Wood-Charlson EM, Weynberg KD, Rattei T, Webster NS | Thermal stress modifies the marine sponge virome. | | Environ Microbiol Rep | 2019 | 5 | 690-698 | 10.1111/1758-2229.12782 | 31283094 | papers |
Lukumbuzya M, Schmid M, Pjevac P, Daims H | A Multicolor Fluorescence Hybridization Approach Using an Extended Set of Fluorophores to Visualize Microorganisms. | | Front Microbiol | 2019 | 10 | 1383 | 10.3389/fmicb.2019.01383 | 31275291 | papers |
Moeller FU, Webster NS, Herbold CW, Behnam F, Domman D, Albertsen M, Mooshammer M, Markert S, Turaev D, Becher D, Rattei T, Schweder T, Richter A, Watzka M, Nielsen PH, Wagner M | Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta. | | Environ. Microbiol. | 2019 | 10 | 3831-3854 | 10.1111/1462-2920.14732 | 31271506 | papers |
Dos Santos-Pinto JRA, Esteves FG, Sialana FJ, Ferro M, Smidak R, Rares LC, Nussbaumer T, Rattei T, Bilban M, Bacci Júnior M, Palma MS, Lubec G | A proteotranscriptomic study of silk-producing glands from the orb-weaving spiders. | | Mol Omics | 2019 | 4 | 256-270 | 10.1039/c9mo00087a | 31268449 | papers |
Bayer B, Pelikan C, Bittner MJ, Reinthaler T, Könneke M, Herndl GJ, Offre P | Proteomic Response of Three Marine Ammonia-Oxidizing Archaea to Hydrogen Peroxide and Their Metabolic Interactions with a Heterotrophic Alphaproteobacterium. | | mSystems | 2019 | 4 | e00181–e00119 | 10.1128/mSystems.00181-19 | 31239395 | papers |
Jung MY, Gwak JH, Rohe L, Giesemann A, Kim JG, Well R, Madsen EL, Herbold CW, Wagner M, Rhee SK | Indications for enzymatic denitrification to N2O at low pH in an ammonia-oxidizing archaeon. | | ISME J | 2019 | 13 | 2633-2638 | 10.1038/s41396-019-0460-6 | 31227816 | papers |
Urrejola C, Alcorta J, Salas L, Vásquez M, Polz MF, Vicuña R, Díez B | Genomic Features for Desiccation Tolerance and Sugar Biosynthesis in the Extremophile sp. UTEX B3054. | | Front Microbiol | 2019 | | 950 | 10.3389/fmicb.2019.00950 | 31134010 | papers |
Tsao HF, Scheikl U, Herbold CW, Indra A, Walochnik J, Horn M | The cooling tower water microbiota: Seasonal dynamics and co-occurrence of bacterial and protist phylotypes. | | Water Res. | 2019 | | 464-479 | 10.1016/j.watres.2019.04.028 | 31128471 | papers |
Zhou LJ, Han P, Yu Y, Wang B, Men Y, Wagner M, Wu QL | Cometabolic biotransformation and microbial-mediated abiotic transformation of sulfonamides by three ammonia oxidizers. | | Water Res. | 2019 | | 444-453 | 10.1016/j.watres.2019.05.031 | 31125804 | papers |
Sialana FJ, Menegasso ARS, Smidak R, Hussein AM, Zavadil M, Rattei T, Lubec G, Palma MS, Lubec J | Proteome Changes Paralleling the Olfactory Conditioning in the Forager Honey Bee and Provision of a Brain Proteomics Dataset. | | Proteomics | 2019 | | e1900094 | 10.1002/pmic.201900094 | 31115157 | papers |
Philippe H, Poustka AJ, Chiodin M, Hoff KJ, Dessimoz C, Tomiczek B, Schiffer PH, Müller S, Domman D, Horn M, Kuhl H, Timmermann B, Satoh N, Hikosaka-Katayama T, Nakano H, Rowe ML, Elphick MR, Thomas-Chollier M, Hankeln T, Mertes F, Wallberg A, Rast JP, Copley RR, Martinez P, Telford MJ | Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria. | | Curr. Biol. | 2019 | 11 | 1818-1826.e6 | 10.1016/j.cub.2019.04.009 | 31104936 | papers |
König L, Wentrup C, Schulz F, Wascher F, Escola S, Swanson MS, Buchrieser C, Horn M | Symbiont-mediated defense against Legionella pneumophila in amoebae | | mBio | 2019 | 10 | e00333-19 | 10.1128/mBio.00333-19 | 31088922 | papers |
Bakuradze T, Tausend A, Galan J, Maria Groh IA, Berry D, Tur JA, Marko D, Richling E | Antioxidative activity and health benefits of anthocyanin-rich fruit juice in healthy volunteers. | | Free Radic. Res. | 2019 | | 1-11 | 10.1080/10715762.2019.1618851 | 31088176 | papers |
Wu L, Ning D, Zhang B, Li Y, Zhang P, Shan X, Zhang Q, Brown M, Li Z, Van Nostrand JD, Ling F, Xiao N, Zhang Y, Vierheilig J, Wells GF, Yang Y, Deng Y, Tu Q, Wang A, Zhang T, He Z, Keller J, Nielsen PH, Alvarez PJJ, Criddle CS, Wagner M, Tiedje JM, He Q, Curtis TP, Stahl DA, Alvarez-Cohen L, Rittmann BE, Wen X, Zhou J | Global diversity and biogeography of bacterial communities in wastewater treatment plants. | | Nat Microbiol | 2019 | 7 | 1183-1195 | 10.1038/s41564-019-0426-5 | 31086312 | papers |
Kiening M, Ochsenreiter R, Hellinger HJ, Rattei T, Hofacker I, Frishman D | Conserved Secondary Structures in Viral mRNAs. | | Viruses | 2019 | 5 | | 10.3390/v11050401 | 31035717 | papers |
Kits KD, Jung MY, Vierheilig J, Pjevac P, Sedlacek CJ, Liu S, Herbold CW, Stein LY, Richter A, Wissel H, Brüggemann N, Wagner M, Daims H | Low yield and abiotic origin of N2O formed by the complete nitrifier Nitrospira inopinata. | | Nat Commun | 2019 | 1 | 1836 | 10.1038/s41467-019-09790-x | 31015413 | papers |
Herp S, Brugiroux S, Garzetti D, Ring D, Jochum LM, Beutler M, Eberl C, Hussain S, Walter S, Gerlach RG, Ruscheweyh HJ, Huson D, Sellin ME, Slack E, Hanson B, Loy A, Baines JF, Rausch P, Basic M, Bleich A, Berry D, Stecher B | Mucispirillum schaedleri antagonizes Salmonella virulence to protect mice against colitis | | Cell Host Microbe | 2019 | 25 | 681-694 | 10.1016/j.chom.2019.03.004 | 31006637 | papers |
Preiner J, Wienkoop S, Weckwerth W, Oburger E | Molecular Mechanisms of Tungsten Toxicity Differ for Glycine max Depending on Nitrogen Regime | | Frontiers in Plant Science | 2019 | 10 | Article 367 | 10.3389/fpls.2019.00367 | 31001297 | papers |
Felkel S, Vogl C, Rigler D, Dobretsberger V, Chowdhary BP, Distl O, Fries R, Jagannathan V, Janečka JE, Leeb T, Lindgren G, McCue M, Metzger J, Neuditschko M, Rattei T, Raudsepp T, Rieder S, Rubin CJ, Schaefer R, Schlötterer C, Thaller G, Tetens J, Velie B, Brem G, Wallner B | The horse Y chromosome as an informative marker for tracing sire lines. | | Sci Rep | 2019 | 1 | 6095 | 10.1038/s41598-019-42640-w | 30988347 | papers |
Tveit AT, Hestnes AG, Robinson SL, Schintlmeister A, Dedysh SN, Jehmlich N, von Bergen M, Herbold CW, Wagner M, Richter A, Svenning MM | Widespread soil bacterium that oxidizes atmospheric methane. | | Proc. Natl. Acad. Sci. U.S.A. | 2019 | 17 | 8515-8524 | 10.1073/pnas.1817812116 | 30962365 | papers |
Forstner, SJ, Wechselberger V, Müller S, Keiblinger KM, Díaz-Pinés E, Wanek W, Scheppi P, Hagedorn F, Gundersen P, Tatzber M, Gerzabek MH, Zechmeister-Boltenstern S | Vertical Redistribution of Soil Organic Carbon Pools After Twenty Years of Nitrogen Addition in Two Temperate Coniferous Forests | | Ecosystems | 2019 | 22 | 379-400 | 10.1007/s10021-018-0275-8 | 30956544 | papers |
Fernando EY, McIlroy SJ, Nierychlo M, Herbst FA, Petriglieri F, Schmid MC, Wagner M, Nielsen JL, Nielsen PH | Resolving the individual contribution of key microbial populations to enhanced biological phosphorus removal with Raman-FISH. | | ISME J | 2019 | 8 | 1933-1946 | 10.1038/s41396-019-0399-7 | 30894691 | papers |
Polzin J, Arevalo P, Nussbaumer T, Polz MF, Bright M | Polyclonal symbiont populations in hydrothermal vent tubeworms and the environment. | | Proc. Biol. Sci. | 2019 | 1896 | 20181281 | 10.1098/rspb.2018.1281 | 30887877 | papers |
Lee KS, Palatinszky M, Pereira FC, Nguyen J, Fernandez VI, Mueller AJ, Menolascina F, Daims H, Berry D, Wagner M, Stocker R | An automated Raman-based platform for the sorting of live cells by functional properties. | | Nat Microbiol | 2019 | 6 | 1035-1048 | 10.1038/s41564-019-0394-9 | 30886359 | papers |
Canarini A, Wanek W, Merchant A, Richter A, Kaiser C | Root exudation of primary metabolites: mechanisms and their roles in plant responses to environmental stimuli | | Frontiers in Plant Science | 2019 | 10 | Article 157 | 10.3389/fpls.2019.00157 | 30881364 | papers |
Hanson CA, Müller AL, Loy A, Dona C, Appel R, Jørgensen BB, Hubert CRJ | Historical factors associated with past environments influence the biogeography of thermophilic endospores in Arctic marine sediments | | Front Microbiol | 2019 | 10 | 245 | 10.3389/fmicb.2019.00245 | 30873129 | papers |
Gorka S, Dietrich M, Mayerhofer W, Gabriel R, Wiesenbauer J, Martin V, Zheng Q, Imai B, Prommer J, Weidinger M, Schweiger P, Eichorst SA, Wagner M, Richter A, Schintlmeister A, Woebken D, Kaiser C | Rapid transfer of plant photosynthates to soil bacteria via ectomycorrhizal hyphae and its interaction with nitrogen availability. | | Front Microbiol | 2019 | | 168 | 10.3389/fmicb.2019.00168 | 30863368 | papers |
Mahnert A, Moissl-Eichinger C, Zojer M, Bogumil D, Mizrahi I, Rattei T, Martinez JL, Berg G | Man-made microbial resistances in built environments. | | Nat Commun | 2019 | 1 | 968 | 10.1038/s41467-019-08864-0 | 30814504 | papers |
Liu XP, Bi QF, Qiu LL, Li KJ, Yang XR, Lin XY | Increased risk of phosphorus and metal leaching from paddy soils after excessive manure application: Insights from a mesocosm study | | Science of The Total Environment | 2019 | 666 | 778-785 | 10.1016/j.scitotenv.2019.02.072 | 30812011 | papers |
Yu X, Polz MF, Alm EJ | Interactions in self-assembled microbial communities saturate with diversity. | | ISME J | 2019 | 6 | 1602-1617 | 10.1038/s41396-019-0356-5 | 30809013 | papers |
Hausmann B, Pelikan C, Rattei T, Loy A, Pester M | Long-term transcriptional activity at zero growth by a cosmopolitan rare biosphere member | | mBio | 2019 | 10 | e02189-18 | 10.1128/mBio.02189-18 | 30755506 | papers |
Wally N, Schneider M, Thannesberger J, Kastner MT, Bakonyi T, Indik S, Rattei T, Bedarf J, Hildebrand F, Law J, Jovel J, Steininger C | Plasmid DNA contaminant in molecular reagents. | | Sci Rep | 2019 | 1 | 1652 | 10.1038/s41598-019-38733-1 | 30733546 | papers |
Berg JS, Pjevac P, Sommer T, Buckner CRT, Philippi M, Hach PF, Liebeke M, Holtappels M, Danza F, Tonolla M, Sengupta A, Schubert CJ, Milucka J, Kuypers MMM | Dark aerobic sulfide oxidation by anoxygenic phototrophs in anoxic waters. | | Environ. Microbiol. | 2019 | 5 | 1611-1626 | 10.1111/1462-2920.14543 | 30689286 | papers |
Weiss R, Palatinszky M, Wagner M, Niessner R, Elsner M, Seidel M, Ivleva NP | Surface-enhanced Raman spectroscopy of microorganisms: limitations and applicability on the single-cell level. | | Analyst | 2019 | 3 | 943-953 | 10.1039/c8an02177e | 30574650 | papers |
Kitzinger K, Padilla CC, Marchant HK, Hach PF, Herbold CW, Kidane AT, Könneke M, Littmann S, Mooshammer M, Niggemann J, Petrov S, Richter A, Stewart FJ, Wagner M, Kuypers MMM, Bristow LA | Cyanate and urea are substrates for nitrification by Thaumarchaeota in the marine environment. | | Nat Microbiol | 2019 | 2 | 234-243 | 10.1038/s41564-018-0316-2 | 30531977 | papers |
Berry D | Up-close-and-personal with the human microbiome | | Environ Microbiol Rep | 2019 | 1 | 17-19 | 10.1111/1758-2229.12709 | 30431239 | other |
Fernández-Gómez B, Díez B, Polz MF, Arroyo JI, Alfaro FD, Marchandon G, Sanhueza C, Farías L, Trefault N, Marquet PA, Molina-Montenegro MA, Sylvander P, Snoeijs-Leijonmalm P | Bacterial community structure in a sympagic habitat expanding with global warming: brackish ice brine at 85-90 °N. | | ISME J | 2019 | 2 | 316-333 | 10.1038/s41396-018-0268-9 | 30228379 | papers |